Insertion junction: CLIP2.029353_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029353
Chromosome:chromosome 3
Location:942873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146687 (1 of 1) PF01871 - AMMECR1 (AMMECR1) CDS
Cre03.g146727 GOX9 Glyoxal oxidase 9; (1 of 2) IPR009880//IPR011043//IPR013783//IPR014756//IPR015202//IPR015916 - Glyoxal oxidase, N-terminal // Galactose oxidase/kelch, beta-propeller // Immunoglobulin-like fold // Immunoglobulin E-set // Domain of unknown function DUF1929 // Galactose oxidase, beta-propeller 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAAGTCCGCCAAAGCTTCCAGCGACGAACGTCCGCATTTGGGCAAGA
Internal bar code:CCCATAGAACGGTAGGAGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1557
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GATGATGATGCCGTGTGTGC
Suggested primer 2:GAGGACTGAAGCCCCAAGAC