Insertion junction: CLIP2.029354_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029354
Chromosome:chromosome 17
Location:2368587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714100 HTA21,HTA32 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCGGTCAGGTACTCCAGCACAGCGGCCAGGTACACGGGTGCGCCGG
Internal bar code:AAACATTGTTATGACGACATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1714
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTATTTGACCCAACCGCCGA
Suggested primer 2:CATGGTGCTCAGGATTGGGT