Insertion junction: CLIP2.029370_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029370
Chromosome:chromosome 4
Location:3173839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226150 AOC1 (1 of 4) PTHR11785:SF367 - AMINO-ACID PERMEASE BAT1; Amino acid carrier CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGTTGTGGTGCTGGGCGTGCAGGGCATGGAGCTGCGGCATTGGCAG
Internal bar code:TTCCGCTGCATATCCACTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1574
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATCAAACAGGCGCGAAG
Suggested primer 2:CAATGTCCGTGTGTGAGGGA