Insertion junction: CLIP2.029375_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029375
Chromosome:chromosome 3
Location:2770985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161578 (1 of 6) IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal intron
Cre03.g161606 (1 of 3) IPR012347 - Ferritin-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCAAGTGGACAGGCCTGGTGCCATTGGGAGGGCCTAACGCGCTTACC
Internal bar code:AGTGACGCTATGACTGACCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5659
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGCTCAACGATATCGGC
Suggested primer 2:ACAGATGCGGTGTGTATGCA