Insertion junction: CLIP2.029387_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029387
Chromosome:chromosome 12
Location:4571513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521600 EEP7 (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos); Endonuclease/exonuclease/phosphatase family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTTGGCTGCGTACGCACGCTGTGTACGGCACGGTATACAGCAAGAA
Internal bar code:TAAGTACGCGGCCGGTGAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1674
LEAP-Seq percent confirming:40.5405
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTCGCGCATGTTCATG
Suggested primer 2:CCACCATATTTGCGACGCTG