Insertion junction: CLIP2.029408_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029408
Chromosome:chromosome 12
Location:2677480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505250 FAP288 (1 of 3) PF13202//PF13499 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_7); EF Hand Containing Flagellar Associated Protein 288 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCGCACGATGTTCCCTGGAGCAAACGGTCGCTCGTGAGGAGCTGGA
Internal bar code:TATAGGGGGGTATGGGAGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1197
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCGCAAGTTCTTCCTCTT
Suggested primer 2:GGCTCTTGGTGTCAGCATCT