Insertion junction: CLIP2.029414_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029414
Chromosome:chromosome 2
Location:5952480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118000 PHR2,PHR6 (1 of 2) PTHR10211 - DEOXYRIBODIPYRIMIDINE PHOTOLYASE; Putative photolyase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCCCGAAGCACCACAGCACGCCGCCGTAGGAGGCGGGGTCACAGCCG
Internal bar code:ATATTGGTGAAAGGTTTTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTTGCTTAGCGCTCTGGT
Suggested primer 2:TAGCTGACCTCGGTGGATGA