Insertion junction: CLIP2.029414_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029414
Chromosome:chromosome 2
Location:5952499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118000 PHR2,PHR6 (1 of 2) PTHR10211 - DEOXYRIBODIPYRIMIDINE PHOTOLYASE; Putative photolyase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCAGCACTCCCATCACCGGCACGCTACGGCGGCGGCCCACTTCCTCGC
Internal bar code:TGTAGGTATACGGTGGACCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2239
LEAP-Seq percent confirming:98.9011
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGACCTCGGTGGATGA
Suggested primer 2:AAGTTGCTTAGCGCTCTGGT