Insertion junction: CLIP2.029439_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029439
Chromosome:chromosome 17
Location:4339154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTAAATAGGCACAGGCCAAGCTCCGCCCACGCACGCCTCGTACGCCT
Internal bar code:GTCATCGTTGATCGCTTCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCCTACCTGCTTGACAA
Suggested primer 2:ACTAAACTCGCCGCTGAACA