Insertion junction: CLIP2.029444_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029444
Chromosome:chromosome 7
Location:669150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317250 CHI5 (1 of 2) K01183 - chitinase (E3.2.1.14); Chitinase-like hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGAGTGTGGCTGGGTTTGAATGCGGTGCCGTGTTTCGCCCCACGGC
Internal bar code:AGATAATAGGTCAGGATCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1157
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGTCGCCTACGTCGAAG
Suggested primer 2:AGGACTTGATTGCATGCGGA