Insertion junction: CLIP2.029457_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029457
Chromosome:chromosome 11
Location:606997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467609 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGTACGACCCCGGCAGCAAGGCGCGGCTGTTGCAGATGGAGAACCA
Internal bar code:GGGGGAAATCACATTTTTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTGTGGAGATGGTGGTG
Suggested primer 2:GTATGAGGCGAACGAGGAGG