Insertion junction: CLIP2.029460_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029460
Chromosome:chromosome 3
Location:283373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144424 (1 of 5) PTHR32467//PTHR32467:SF15 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGGACAAGACGATGATCAAGGTCGACATCCTTGTCGTCAAGCAGCAG
Internal bar code:TGGCGGCAGTACTCCTGTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:997
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGGTGGTGAGCACGAC
Suggested primer 2:CGAGTATCATGGCGCGTTTG