Insertion junction: CLIP2.029464_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029464
Chromosome:chromosome 9
Location:2389431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393850 MAPKKK2,PTK28,MAPKKK2 Mitogen-Activated Protein Kinase Kinase Kinase; (1 of 1) IPR000719//IPR001229//IPR001245//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Jacalin-like lectin domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACCGGTGACGTCTGCGGAACAGATTGGCAGGAAGTAGTTGTAGGGG
Internal bar code:GTTTGTATATTGTGTCGTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1138
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGACTTGCCTCCTTCTG
Suggested primer 2:CGACACTCCTCAACACGACA