Insertion junction: CLIP2.029469_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029469
Chromosome:chromosome 1
Location:3619587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023550 FAP234,TPG2 Flagellar Associated Protein 234; (1 of 1) PTHR24365//PTHR24365:SF301 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGCAAGGAGGTGGTGGGCGGGGGCCGGGAGCCGGCGGCGTGTCTCG
Internal bar code:GCTGACATTAAGGCCTGAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:638
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCGAGAATGCTGATGG
Suggested primer 2:ATGGAACCCCTGCACGATTT