Insertion junction: CLIP2.029471_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029471
Chromosome:chromosome 13
Location:4211117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591600 CYG40 (1 of 70) 4.6.1.2 - Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATGCAGGTTTGCAGGCGTTTGTGCGTCTAGCTTCCTGCAGACGGTAT
Internal bar code:GAGGGATTGCTAGTTAGGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:300
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATCTGAGGATGCGTGGG
Suggested primer 2:CGGTCACTGCCAGATATCCC