Insertion junction: CLIP2.029473_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029473
Chromosome:chromosome 15
Location:1216012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801719 NCL59 Nuclear Control of chloroplast-Like 59; (1 of 5) IPR013584//IPR016024 - RAP domain // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCAGCAGGTGCGGTGGCGGGAAGGAGGGGGCCGCCGTCGCTGAGCAC
Internal bar code:CGATGGTAAGGGCGTGGTCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:60.6061
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATACGAGGTGCAGCATG
Suggested primer 2:GTTGTTGGCGTTGTCAGTCC