Insertion junction: CLIP2.029485_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029485
Chromosome:chromosome 3
Location:1038479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800291 (1 of 9) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTATGCACTTGAGCAGGCGGCGGATGCAGCGGCAGCAGCCAGTCCTCG
Internal bar code:ATTGGCAAGCGCGCATTATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTCAGAGAACAGGTTCC
Suggested primer 2:GGTGACTACCGAACACTGCA