Insertion junction: CLIP2.029489_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029489
Chromosome:chromosome 3
Location:439938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCTGGCGGGGCCGCTGGCGGCGGGGGCGCGCGGCGCGGTGTGGCGGC
Internal bar code:CTATACTGGGGGGTGCGTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTCGGATCCTCATGGAG
Suggested primer 2:CCCTGGGCGGTTACATTGAT