Insertion junction: CLIP2.029503_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029503
Chromosome:chromosome 3
Location:8100305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201100 FTSHi1,FTSHI4,FTSHi4,FHL1,FHL6 (1 of 1) PTHR23076//PTHR23076:SF61 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED; Chloroplast-import FtsH-like ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGTGACAGACATTACGGCTAAAGCTGTTGCGAGAACGCCGCAGCAGC
Internal bar code:CTTTAGCGATCGTTTGCCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGTACTTGACGGATCAA
Suggested primer 2:GCGGACGATGGAAATTCAGC