Insertion junction: CLIP2.029504_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029504
Chromosome:chromosome 6
Location:5100085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282700 (1 of 1) PTHR24414//PTHR24414:SF29 - FAMILY NOT NAMED // SEGMENTATION PROTEIN CAP'N'COLLAR CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCATGCGCTGCTGCTGGTGCGGCGCCAGGCGAGCTATCTGCAGGTGT
Internal bar code:AGAGCAATCTCTCCGTGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2295
LEAP-Seq percent confirming:84.7826
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTTCACACCGCTCCTAA
Suggested primer 2:CAGTAGCCAGCCGCATATGA