Insertion junction: CLIP2.029512_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029512
Chromosome:chromosome 12
Location:1191633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490451 (1 of 16) IPR011044 - Quinoprotein amine dehydrogenase, beta chain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGCCCCGATGGCGAGTGGATGGCAACGTGCGGAGGCAGCAACAACGT
Internal bar code:GTTATGCAGCATACGAGGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1252
LEAP-Seq percent confirming:36.1111
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCGGCCAGGGTTCAATA
Suggested primer 2:CGTGTAGTCTGTGGTGCTGT