Insertion junction: CLIP2.029517_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029517
Chromosome:chromosome 7
Location:5666274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352650 (1 of 2) PTHR23139//PTHR23139:SF58 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGACCGGCATCACCATCCCCGTGCCGCCGCCCACCGTGTCCGACAGG
Internal bar code:GGTGAAAGAGCTAGGGCTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:438
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGCCTGATACCGTGATA
Suggested primer 2:GAGGGCGAATATGAGGGAGC