Insertion junction: CLIP2.029518_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029518
Chromosome:chromosome 1
Location:7698062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054100 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATCAGTAGGCTGCAGCTGAGTACGGTGCTGGGCACTGACTGTCTGTGT
Internal bar code:AACGTTGGAGAAGGGGGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:735
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACACTACACCATCACCA
Suggested primer 2:CTGAGCCGCAATGCCATTAC