Insertion junction: CLIP2.029525_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029525
Chromosome:chromosome 4
Location:2283229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGAGATTGACTCCTATGATTGCTCGGGTAGTTGGTGTGAGGAGTTG
Internal bar code:GCAACAACAAGCGAGTTTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:743
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAAGGAATCGCTGGTGG
Suggested primer 2:CGAAGGTTGTGTGGGGATGA