Insertion junction: CLIP2.029546_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029546
Chromosome:chromosome 1
Location:3141565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020050 (1 of 4) IPR000533 - Tropomyosin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCGCGGGTACAGGCTAGGCAGGGAGGGTGAAGCCGTGTAGCCGAGA
Internal bar code:GGGTCCATAGGGCTTTTTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:882
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCAGGCTAAAGCGCGAC
Suggested primer 2:AACCCTTTCTGGCAAACCCA