Insertion junction: CLIP2.029553_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029553
Chromosome:chromosome 1
Location:4809525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033500 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGGTACCAAGTCTAGGAACAGCCGCCGCAGCGTGGGCGCGGGGCAGT
Internal bar code:TGGGTTCTCTTTGATACCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5726
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAAGTTACGGGCCTGTG
Suggested primer 2:TTACTTGGCGACTCCCACAC