Insertion junction: CLIP2.029585_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029585
Chromosome:chromosome 2
Location:2744732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093850 (1 of 1) IPR000104//IPR000595//IPR001611//IPR003591//IPR018490 - Antifreeze protein, type I // Cyclic nucleotide-binding domain // Leucine-rich repeat // Leucine-rich repeat, typical subtype // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAACAGAGCGCGCATTGCACCCACGCAGGTTCATCCGACCCTCAGTA
Internal bar code:GAAATACCTCAACGACTGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3684
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAACCTGAACAAGCTGC
Suggested primer 2:CCTGCGTCTGGTGTACAAGT