Insertion junction: CLIP2.029589_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029589
Chromosome:chromosome 3
Location:7555401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCGTAGTCGCGCGCTGGGTCATCCAGAGGCCAGCCGCTCTTGTCAAG
Internal bar code:TGTGTAGTAAGGGGTATAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2322
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTCCTTGCCATTTCGCA
Suggested primer 2:GACTGACACGTGTACCTGCA