Insertion junction: CLIP2.029599_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029599
Chromosome:chromosome 17
Location:5257661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802106 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCCCGGTCAATGTCATTCATGCCCGCCCCTCGTACCTGAGCATTATC
Internal bar code:TATCGGCCCCGCAGAGTCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2632
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTTAAGCACGCCTTCCT
Suggested primer 2:AAGCGGTTGAGGTCGGTTAG