Insertion junction: CLIP2.029606_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029606
Chromosome:chromosome 1
Location:1473527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007901 (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGTGTCATACACCAAGCCAGCCACCTTGTCTAAACCGGACTTTGGTT
Internal bar code:TCTGAGCCACTAGTAACTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:683
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGCCAACCAGTACATGAT
Suggested primer 2:AGGTGACACAGAAGCTGACG