Insertion junction: CLIP2.029619_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029619
Chromosome:chromosome 3
Location:5441331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCATTGTTTCTGCACATAAAACAGTGTGCATCTGTTGCAGCTGCTGGG
Internal bar code:TGAAAAGGGAGAATCGCCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1874
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTGGATGGCTTGGTTTA
Suggested primer 2:GGTATCAGGTCATGAGCGGG