Insertion junction: CLIP2.029629_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029629
Chromosome:chromosome 17
Location:5474438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739050 (1 of 230) IPR017986 - WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATTAGGGGGAGATGCGAGGCATGGTCGTAGAGGGTGGAGAGATGCAC
Internal bar code:GTACGCCCTGCACGGTTCGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGTGTTTCATTCGGCGC
Suggested primer 2:GAAGTGTGATGGAGGCCCTC