Insertion junction: CLIP2.029630_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029630
Chromosome:chromosome 1
Location:1479141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007901 (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACTCTCCACACACACACACCCCACACACTCCCACATACTCCCACACT
Internal bar code:TACTAGTGCAATAAACCCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1384
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGTGAAGTGCCGACGT
Suggested primer 2:GTCATGTGCCCAAACCCAAC