Insertion junction: CLIP2.029630_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029630
Chromosome:chromosome 1
Location:1479144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007901 (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGATGGGTGGCTGGTGGTTGTGGTGGTTGTGGTTGTGGTGGTGGCGG
Internal bar code:TACTAGTGCAATAAACCCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATGTGCCCAAACCCAAC
Suggested primer 2:ATGAAGTGAAGTGCCGACGT