Insertion junction: CLIP2.029631_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029631
Chromosome:chromosome 15
Location:1229559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801722 NCL62 Nuclear Control of chloroplast-Like 62; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCAATAAGCGACTCCGGGCCTAGCCGCAGCAGCTCGCCCAGCCGGC
Internal bar code:AGTGGCTTTGGGAGCGCGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1068
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTGCCGGCTTTAAACCA
Suggested primer 2:TGGTGAGGAAGTGGTCTGGA