Insertion junction: CLIP2.029646_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029646
Chromosome:chromosome 4
Location:1453790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214000 (1 of 1) PTHR19331//PTHR27000 - LYSYL OXIDASE-RELATED // FAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACGGTGACATGCCTGGTGAGCAGCATGCGTGGTGGGGGGCGTGTGC
Internal bar code:ACTCTGCAGCCACTAACGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1244
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CATATGCCACGCAGGTTTCG
Suggested primer 2:GCTTTAATGTGGAGCGCTCG