Insertion junction: CLIP2.029649_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029649
Chromosome:chromosome 5
Location:495783
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244150 (1 of 1) IPR002073//IPR020683 - 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCGAAGTGGTGACACGGGCCGTGTGCGACCGCTGCCATGAGCCAAC
Internal bar code:AATTGGCCACGTACGGATCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1965
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTGTCTTGCCGCCAAAA
Suggested primer 2:TGCGACTACACCACCTTGTC