Insertion junction: CLIP2.029650_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029650
Chromosome:chromosome 3
Location:1966222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155501 (1 of 1) PTHR30269 - TRANSMEMBRANE PROTEIN YFCA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACACTAACACATATGCATACGTGCTCTTACGCGCCACTTTGCCCGCA
Internal bar code:TAATGTTGAAAGACTGCCCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4275
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTGACCCGGATCCCTCA
Suggested primer 2:GGTATAGTCCTCGGCCTTGC