Insertion junction: CLIP2.029651_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029651
Chromosome:chromosome 3
Location:3005549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800312 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCAGACCCTCGGCGAATGGGCGCCGGGGGCGGCTATGGAGCCGTGC
Internal bar code:TTCCTACATTTCTCTATCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2021
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGACAGAGGGAGGGTTGC
Suggested primer 2:CAGCCAGTTTTGGTGTGACG