Insertion junction: CLIP2.029651_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029651
Chromosome:chromosome 3
Location:3005550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800312 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGGCGAGTCTGTTGTTTTGGGTCAGGAAGTAAAGGGCGGCAGCGACG
Internal bar code:TTCCTACATTTCTCTATCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1315
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCAGTTTTGGTGTGACG
Suggested primer 2:GAAGACAGAGGGAGGGTTGC