Insertion junction: CLIP2.029659_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029659
Chromosome:chromosome 7
Location:2435785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329050 NCD7,AOC5 Cationic amino acid transporter; (1 of 2) K03294 - basic amino acid/polyamine antiporter, APA family (TC.APA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTACAGTCACAGCAGCGTACTTACGTGGCCACCCAGGGGGTCTGCT
Internal bar code:GATGAGACATATTGCGTCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1534
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATGATGCAGGCACATGC
Suggested primer 2:TCCACTATGTTGTACGCGGG