Insertion junction: CLIP2.029664_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029664
Chromosome:chromosome 16
Location:1340735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651801 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTACGTGGGGCGCCTGGCTGCGGCTGTGACCGCTGCGGCCATGCCG
Internal bar code:TACTCCCGCAATGCTTGTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2921
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCAGTACCAGCACCATC
Suggested primer 2:CGTAACTAGCGCACATGCAC