Insertion junction: CLIP2.029676_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029676
Chromosome:chromosome 3
Location:247801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144324 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACACGCATACACATACACACCTTTCTCATTGCACCTTCTAACGTGCA
Internal bar code:TATGTCTGAGAAAGACCCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:129
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCACCCATCCATACACA
Suggested primer 2:GGGTAGGAGCTTACGTACGC