Insertion junction: CLIP2.029687_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029687
Chromosome:chromosome 3
Location:1665450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152950 PUS12 (1 of 1) 4.2.1.70//5.4.99.12 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGAATTGTGCTATCTCCCGCCTTTCTTGGCGCCGCGCAGACCAACA
Internal bar code:GGCGAAGTGCCGTAGCGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GACAACACCTCAACACACGC
Suggested primer 2:ATCAGTGAGGCCAACTTCGG