Insertion junction: CLIP2.029705_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029705
Chromosome:chromosome 9
Location:5943762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412150 PPR11 (1 of 12) IPR002885 - Pentatricopeptide repeat; PentatricoPeptide Repeat protein 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGGGAGAGGGGAGGGGGGAGGCGGTGGTGGGTGGAATCCGCGCTCG
Internal bar code:ACTTAATTTTTGGTGGCGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:220
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGTGATGTGGC
Suggested primer 2:ACTGATGCTGACGGATGCAA