Insertion junction: CLIP2.029706_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029706
Chromosome:chromosome 10
Location:466787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420900 HEL44 (1 of 1) K13181 - ATP-dependent RNA helicase DDX27 [EC:3.6.4.13] (DDX27, DRS1); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGAAGTCCAAGGCGGCTGCCAACAAGGCTGAAAAGCGCGCCGAGCG
Internal bar code:AGTTCACATACATGCGGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:68.5714
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCCTACTGTCCCACGGC
Suggested primer 2:ACACAGGCCGTCAACATGAT