Insertion junction: CLIP2.029708_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029708
Chromosome:chromosome 7
Location:3599477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAGAAGCGTCAATGGAGTCCACGTCCGCGCAGGACGCTCCCTTTTGC
Internal bar code:TGGCTGGCGGCCAGGCACGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1778
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCCACGTATTGCAGAGG
Suggested primer 2:GTGTCGTTCCCACAAAACCG