Insertion junction: CLIP2.029714_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029714
Chromosome:chromosome 9
Location:5381857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408100 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGATTGGATGGACTACCCCAGCCTCAGCCACCACACCCCGCGACACAC
Internal bar code:AGGGGATAATTTAAGTTTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTCTTCACGCAACTGTA
Suggested primer 2:GTGTGTGTGTGTCCATGTGC