Insertion junction: CLIP2.029753_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029753
Chromosome:chromosome 13
Location:880188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567500 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCCATGCTTTACAGGAGCTCCGAGCTTAAAGCGGCAAGCGGCTTACC
Internal bar code:TGATATAGGTGTTCTTCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1668
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGTCAAGTCGGGGTTA
Suggested primer 2:CTGCTCCTGAGTCTGGTTGG