Insertion junction: CLIP2.029781_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029781
Chromosome:chromosome 15
Location:5669102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801854 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTCAGGTTACAGGCTTCCTGTCAGTGCGCCCGCTGTGCGCCATAATA
Internal bar code:ATAACTGCGGGGATTGAACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:819
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCAGGATGGAAACGAGG
Suggested primer 2:AACCGCAAGAGGTGTACAGG